Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015815791.1_cds_XP_016498497.1_12522
CDS Infomation

[gene=LOC107817221] [db_xref=GeneID:107817221] [protein=vignain-like] [protein_id=XP_016498497.1] [location=join(11673..12114,12269..12501,12594..12734,13254..13511)] [gbkey=CDS]
Sequence

ATGGAGTTAGGGAAGATTTTCTTAATTTCTCTTTTGTTGGCTATGGCATTTGGGTTAGTT
CAGAGCTTAGAGTTCTCCGAAAAAGACACAGCATCTGAAGAGAGCTTATGGCATTTGTAC
CAGAGATGGAGGAGCCATCACACTGTTTCTCGAGACCTAAGCGAGAAACAAAAACGTTTC
AATGTATTCAAGGCGAATGTGATGCACGTTCACAGGGTGAACAAGATGGACAGGCCTTAT
AAGTTGAAACTCAACGAGTTTGCTGATATGACCAATCATGAATTCAGAAATTTTTACAGC
TCTAAGGTAAAACACTTTAGAATGCTCCATGGTAGCCAGCCTACTACCGGATTTATGCAC
GACAAGGCTGATAACCTGCCACCATCCGTCGATTGGAGAAAGCAAGGCGCTGTCACTGGT
GTAAAGAATCAAGGCAAATGCGGTAGTTGTTGGGCATTTTCTGCAGTTGTTGGGGTTGAG
GGAATAAACAAAATCAAGACTGGCCAATTAATTTCCCTTTCTGAACAAGAGCTTGTTGAT
TGTGAAAAGGATAATGAAGGATGCAATGGAGGACTAATGGAAAATGCCTATGAATTCATC
AAGAAAAATGGAGGAATAACAACTGAGGGGATCTATCCTTACAGAGCAAGAGACAGTCGC
TGTGATTCTTCAAAGATGAATTCCCCGGTGGTTAATATCGATGGACACGAAATGGTACCT
ACAAACGACGAGGATGCTTTGATGAAAGCTGTTGCCAACCAACCAGTATCTGTTGCTATT
GATGCTAGTGGTTCCGATCTGCAGTTTTACTCTGAGGGAGTGTTCAATGGAAATTGTGGC
ACAGAACTAGACCATGGTGTAGCAGTTGTGGGCTATGGAGCAACTCATGATGGAACGAAG
TATTGGATAGTGAAGAACTCATGGGGGACTGGATGGGGAGAAGAAGGTTATTTTAGGATG
GAACGAGGCATCGACGTTGAAGAAGGACTCTGTGGCATAGCCATGGAAGCTTCATATCCA
GTCAAGTTATCCGCGGACAATCCAAAACCAGCTCCCTCTAAGGATGAACTCTAG

Peptide Sequence

PEP ID

XP_016498497.1
PEP Infomation

PREDICTED: vignain-like [Nicotiana tabacum]
Sequence

MELGKIFLISLLLAMAFGLVQSLEFSEKDTASEESLWHLYQRWRSHHTVSRDLSEKQKRF
NVFKANVMHVHRVNKMDRPYKLKLNEFADMTNHEFRNFYSSKVKHFRMLHGSQPTTGFMH
DKADNLPPSVDWRKQGAVTGVKNQGKCGSCWAFSAVVGVEGINKIKTGQLISLSEQELVD
CEKDNEGCNGGLMENAYEFIKKNGGITTEGIYPYRARDSRCDSSKMNSPVVNIDGHEMVP
TNDEDALMKAVANQPVSVAIDASGSDLQFYSEGVFNGNCGTELDHGVAVVGYGATHDGTK
YWIVKNSWGTGWGEEGYFRMERGIDVEEGLCGIAMEASYPVKLSADNPKPAPSKDEL

Transcript Sequence

Gene sequence data has not been registered.